STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A8IRN8_CHLREPredicted protein. (66 aa)    
Predicted Functional Partners:
APC3
TPR_REGION domain-containing protein.
     
  0.540
A0A2K3CVM5
Uncharacterized protein.
     
  0.540
A0A2K3CVZ5
Uncharacterized protein.
     
  0.540
A0A2K3CZ15
TPR_REGION domain-containing protein.
     
  0.540
APC10
DOC domain-containing protein.
     
  0.540
APC1
APC1_C domain-containing protein.
     
  0.540
APC4
Uncharacterized protein.
     
  0.540
A0A2K3DBV0
CULLIN_2 domain-containing protein; Belongs to the cullin family.
     
  0.540
CDC20
WD_REPEATS_REGION domain-containing protein.
     
  0.540
A0A2K3DFB9
WD_REPEATS_REGION domain-containing protein.
     
  0.540
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.