STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS15aRibosomal protein S15a. (130 aa)    
Predicted Functional Partners:
RPS28
Uncharacterized protein.
   
 0.996
RPS3
Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.996
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.996
RPS14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
 
 0.996
RPS16
Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.995
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.995
RPS19
Ribosomal protein S19.
   
 0.995
RPS4
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 0.995
RPS11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.995
RPS13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.994
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.