STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHY1SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (388 aa)    
Predicted Functional Partners:
COX15
Uncharacterized protein.
  
 
 0.987
COX11
Cytochrome c oxidase assembly protein.
  
 
 0.985
COX10
Uncharacterized protein.
  
 
 0.967
SCO1
Thioredoxin domain-containing protein.
  
  
 0.893
CYC
Mitochondrial cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.882
COX12
Mitochondrial cytochrome c oxidase subunit.
   
  
 0.871
cox3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
  
  
 0.712
THY28
Predicted protein.
    
  0.685
cyc1
Cytochrome c1.
   
 0.678
COX17
Cytochrome c oxidase assembly protein.
   
  
 0.674
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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