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CPH1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CPH1" - Cryptochrome photoreceptor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPH1Cryptochrome photoreceptor (1008 aa)    
Predicted Functional Partners:
CK1
Ser/thr kinase (333 aa)
       
  0.791
MUT9
Serine/threonine protein kinase, transcription repression (699 aa)
       
  0.691
PHOT
Phototropin (750 aa)
     
   
  0.661
POLA1
DNA polymerase alpha subunit one (1114 aa)
     
   
  0.650
EDP07588
Predicted protein (287 aa)
       
  0.623
EDO97462
MUT9-related serine/threonine protein kinase (603 aa)
       
  0.623
CDT1
DNA replication initiation factor (1103 aa)
           
  0.608
CFA1
Cyclopropane fatty acid synthase (1151 aa)
         
  0.563
EDP01114
Predicted protein (2212 aa)
     
   
  0.496
EDO98775
Flavoprotein (539 aa)
         
  0.491
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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