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EDO98584 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDO98584" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDO98584Predicted protein; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3’,5’- phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs (By similarity) (476 aa)    
Predicted Functional Partners:
EDP04348
Predicted protein (772 aa)
     
  0.791
EDP08274
Predicted protein (260 aa)
 
 
  0.753
EDO98910
Predicted protein (271 aa)
     
  0.695
RCL1
RNA terminal 3’ phosphate cyclase (370 aa)
   
   
  0.549
EDP03048
Predicted protein (264 aa)
     
      0.535
MKP5
MAP kinase phosphatase 5 (468 aa)
     
 
  0.504
PIN4
Peptidyl-prolyl cis-trans isomerase, parvulin-type (255 aa)
     
      0.477
GUA1
GMP synthetase (535 aa)
     
   
  0.447
EDP08762
Predicted protein (444 aa)
           
  0.434
PRFB1
Peptide chain release factor (263 aa)
   
   
  0.413
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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