SFU18800.1 protein (Algoriphagus locisalis) - STRING interaction network

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Score

SFU18800.1

ATPase components of ABC transporters with duplicated ATPase domains. (529 aa)

Predicted Functional Partners:

rplN

0.841

rplD

0.831

rplU

0.825

rpsO

0.824

rpsC

0.824

rplM

0.824

rpmH

0.820

rplR

0.820

rplC

0.820

rplT

0.819

Your Current Organism:

Algoriphagus locisalis

NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFU18800.1	rplC	SAMN04489724_0036	SAMN04489724_1557	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.820
SFU18800.1	rplD	SAMN04489724_0036	SAMN04489724_1556	ATPase components of ABC transporters with duplicated ATPase domains.	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.831
SFU18800.1	rplM	SAMN04489724_0036	SAMN04489724_4466	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.824
SFU18800.1	rplN	SAMN04489724_0036	SAMN04489724_1547	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.841
SFU18800.1	rplR	SAMN04489724_0036	SAMN04489724_1541	ATPase components of ABC transporters with duplicated ATPase domains.	Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.820
SFU18800.1	rplT	SAMN04489724_0036	SAMN04489724_1318	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.819
SFU18800.1	rplU	SAMN04489724_0036	SAMN04489724_0361	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.825
SFU18800.1	rpmH	SAMN04489724_0036	SAMN04489724_0205	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.820
SFU18800.1	rpsC	SAMN04489724_0036	SAMN04489724_1551	ATPase components of ABC transporters with duplicated ATPase domains.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.824
SFU18800.1	rpsO	SAMN04489724_0036	SAMN04489724_1309	ATPase components of ABC transporters with duplicated ATPase domains.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.824
rplC	SFU18800.1	SAMN04489724_1557	SAMN04489724_0036	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ATPase components of ABC transporters with duplicated ATPase domains.	0.820
rplC	rplD	SAMN04489724_1557	SAMN04489724_1556	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplM	SAMN04489724_1557	SAMN04489724_4466	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplN	SAMN04489724_1557	SAMN04489724_1547	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.999
rplC	rplR	SAMN04489724_1557	SAMN04489724_1541	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplC	rplT	SAMN04489724_1557	SAMN04489724_1318	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.996
rplC	rplU	SAMN04489724_1557	SAMN04489724_0361	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplC	rpmH	SAMN04489724_1557	SAMN04489724_0205	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.986
rplC	rpsC	SAMN04489724_1557	SAMN04489724_1551	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsO	SAMN04489724_1557	SAMN04489724_1309	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997