STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU19243.1Two component regulator propeller. (1000 aa)    
Predicted Functional Partners:
SFT35909.1
Two component regulator propeller.
 
 0.964
SFU17401.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 0.955
SFU17790.1
PAS domain S-box-containing protein.
  
 0.954
SFU13638.1
PAS domain S-box-containing protein.
  
 0.951
SFT44067.1
PAS domain S-box-containing protein.
  
 0.944
SFT91698.1
Signal transduction histidine kinase.
  
 0.944
SFU19249.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.922
SFT55096.1
GAF domain-containing protein.
  
 0.918
SFT38102.1
Predicted ATPase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
 0.916
SFT55063.1
PAS domain S-box-containing protein.
   
 0.786
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.