Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFT53380.1 | SFU02718.1 | SAMN04489724_1190 | SAMN04489724_3414 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.558 |
SFT53380.1 | SFU20512.1 | SAMN04489724_1190 | SAMN04489724_0321 | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | DNA repair protein RadC. | 0.492 |
SFU02718.1 | SFT53380.1 | SAMN04489724_3414 | SAMN04489724_1190 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.558 |
SFU02718.1 | SFU20512.1 | SAMN04489724_3414 | SAMN04489724_0321 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | DNA repair protein RadC. | 0.456 |
SFU07834.1 | SFU17790.1 | SAMN04489724_3743 | SAMN04489724_4702 | comF family protein. | PAS domain S-box-containing protein. | 0.836 |
SFU07834.1 | SFU20512.1 | SAMN04489724_3743 | SAMN04489724_0321 | comF family protein. | DNA repair protein RadC. | 0.417 |
SFU17790.1 | SFU07834.1 | SAMN04489724_4702 | SAMN04489724_3743 | PAS domain S-box-containing protein. | comF family protein. | 0.836 |
SFU17790.1 | SFU20512.1 | SAMN04489724_4702 | SAMN04489724_0321 | PAS domain S-box-containing protein. | DNA repair protein RadC. | 0.406 |
SFU17790.1 | mutL | SAMN04489724_4702 | SAMN04489724_3683 | PAS domain S-box-containing protein. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.408 |
SFU20512.1 | SFT53380.1 | SAMN04489724_0321 | SAMN04489724_1190 | DNA repair protein RadC. | Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.492 |
SFU20512.1 | SFU02718.1 | SAMN04489724_0321 | SAMN04489724_3414 | DNA repair protein RadC. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.456 |
SFU20512.1 | SFU07834.1 | SAMN04489724_0321 | SAMN04489724_3743 | DNA repair protein RadC. | comF family protein. | 0.417 |
SFU20512.1 | SFU17790.1 | SAMN04489724_0321 | SAMN04489724_4702 | DNA repair protein RadC. | PAS domain S-box-containing protein. | 0.406 |
SFU20512.1 | mutL | SAMN04489724_0321 | SAMN04489724_3683 | DNA repair protein RadC. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.417 |
SFU20512.1 | mutS | SAMN04489724_0321 | SAMN04489724_3736 | DNA repair protein RadC. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.412 |
mutL | SFU17790.1 | SAMN04489724_3683 | SAMN04489724_4702 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | PAS domain S-box-containing protein. | 0.408 |
mutL | SFU20512.1 | SAMN04489724_3683 | SAMN04489724_0321 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | DNA repair protein RadC. | 0.417 |
mutL | mutS | SAMN04489724_3683 | SAMN04489724_3736 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.994 |
mutS | SFU20512.1 | SAMN04489724_3736 | SAMN04489724_0321 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | DNA repair protein RadC. | 0.412 |
mutS | mutL | SAMN04489724_3736 | SAMN04489724_3683 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.994 |