STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT36281.1Hypothetical protein; Manually curated. (83 aa)    
Predicted Functional Partners:
SFU08666.1
Glutamate synthase (NADH) large subunit.
    
 0.879
SFU19093.1
Acyl transferase domain-containing protein.
  
 0.867
SFU17401.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
   
 0.819
SFT36303.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.775
SFU17790.1
PAS domain S-box-containing protein.
  
 0.726
SFU13638.1
PAS domain S-box-containing protein.
   
 0.720
SFT36395.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
     0.716
SFT77674.1
Adenylate cyclase, class 3.
   
 0.608
SFT38102.1
Predicted ATPase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.607
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.568
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.