STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT37174.1TonB-linked outer membrane protein, SusC/RagA family. (1208 aa)    
Predicted Functional Partners:
SFT37153.1
Starch-binding associating with outer membrane.
 
 
   0.969
SFT36437.1
Starch-binding associating with outer membrane.
 
 
   0.838
SFU15548.1
Susd and RagB outer membrane lipoprotein.
 
 
   0.813
SFT91136.1
Starch-binding associating with outer membrane.
 
 
   0.811
SFT55319.1
Starch-binding associating with outer membrane.
 
 
   0.766
SFT91975.1
Starch-binding associating with outer membrane.
 
 
   0.756
SFT84395.1
SusD family protein.
  
 
   0.750
SFT38611.1
Starch-binding associating with outer membrane.
 
 
   0.742
SFT37079.1
PhoPQ-activated pathogenicity-related protein.
  
     0.731
SFU18031.1
Starch-binding associating with outer membrane.
 
 
   0.714
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.