STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT39889.1Glycosyl transferase family 2. (315 aa)    
Predicted Functional Partners:
SFT39830.1
Glycosyl transferase family 2.
 
     0.937
SFT39868.1
Glycosyl transferase family 2.
 
     0.870
SFT39808.1
Hypothetical protein.
  
    0.776
SFT39790.1
2-methylcitrate dehydratase PrpD.
       0.773
SFT39851.1
Hypothetical protein.
       0.773
SFT39911.1
G-rich domain on putative tyrosine kinase.
       0.773
SFT40210.1
Glycosyl transferase family 2.
  
     0.769
SFT73650.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.766
SFT39984.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.735
SFT45673.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.697
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.