STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT65327.1Hypothetical protein. (1154 aa)    
Predicted Functional Partners:
SFU20889.1
Microcystin-dependent protein.
   
   0.806
SFT90057.1
Hypothetical protein.
  
     0.774
SFU03165.1
Outer membrane protein assembly factor BamA.
  
     0.774
SFT90046.1
Peptidase family C25.
  
     0.756
SFT65347.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
     0.730
SFU17735.1
Hypothetical protein.
  
     0.713
SFT71945.1
Lamin Tail Domain.
  
     0.671
SFT43386.1
Protein of unknown function.
 
 
   0.627
SFU17879.1
Peptidase family C25.
  
     0.590
SFU02430.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.589
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.