STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT90268.1Hexosaminidase. (757 aa)    
Predicted Functional Partners:
SFT90276.1
Sialidase-1.
 
 
 0.833
SFT88465.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.726
SFU07298.1
Beta-glucosidase.
    
 0.689
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.650
SFU09963.1
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
  
  0.610
SFT95615.1
Alpha-1,2-mannosidase, putative.
 
   
 0.605
SFU18133.1
Glycosyl hydrolase family 20, domain 2.
  
  
 
0.547
SFT74783.1
alpha-L-fucosidase.
 
   
 0.544
SFT91239.1
Mannobiose 2-epimerase.
    
  0.516
SFT92307.1
Histidine ammonia-lyase.
   
    0.508
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
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