STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU04408.1Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (425 aa)    
Predicted Functional Partners:
SFU08666.1
Glutamate synthase (NADH) large subunit.
  
 0.999
SFT84526.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.961
SFU19756.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.930
SFT51888.1
Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family.
  
 0.911
SFU19093.1
Acyl transferase domain-containing protein.
  
 
 0.900
SFU08655.1
Glutamate synthase (NADPH/NADH) small chain.
  
 0.896
SFU04398.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
      0.890
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 0.855
SFT72873.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.830
SFU20633.1
Carbon-nitrogen hydrolase.
   
 
  0.824
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
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