STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU15846.1Selenocysteine lyase/Cysteine desulfurase. (421 aa)    
Predicted Functional Partners:
SFT39395.1
Iron-regulated ABC transporter ATPase subunit SufC.
 
 
 0.932
SFT39323.1
Cysteine desulfuration protein SufE.
 
 0.925
SFT39436.1
Iron-regulated ABC transporter membrane component SufB.
 
 0.914
SFT39375.1
Iron-regulated ABC transporter permease protein SufD.
 
 0.912
SFT39345.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
  
 
0.849
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.833
SFT55463.1
Thioredoxin reductase (NADPH).
  
 
  0.832
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
    
 0.807
SFT91385.1
Thioredoxin reductase (NADPH).
   
 
  0.800
SFU03755.1
Thioredoxin reductase (NADPH).
   
 
  0.800
Your Current Organism:
Algoriphagus locisalis
NCBI taxonomy Id: 305507
Other names: A. locisalis, Algoriphagus locisalis Yoon et al. 2005, DSM 23445, JCM 12597, KCTC 12310, strain MSS-170
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