Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFU12506.1 | SFU16114.1 | SAMN04489724_4118 | SAMN04489724_4512 | Histidinol-phosphate aminotransferase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.861 |
SFU12506.1 | SFU16131.1 | SAMN04489724_4118 | SAMN04489724_4514 | Histidinol-phosphate aminotransferase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.584 |
SFU12506.1 | SFU16140.1 | SAMN04489724_4118 | SAMN04489724_4515 | Histidinol-phosphate aminotransferase. | Prephenate dehydratase. | 0.706 |
SFU12506.1 | SFU16155.1 | SAMN04489724_4118 | SAMN04489724_4517 | Histidinol-phosphate aminotransferase. | Prephenate dehydrogenase. | 0.898 |
SFU12506.1 | SFU20711.1 | SAMN04489724_4118 | SAMN04489724_0350 | Histidinol-phosphate aminotransferase. | Aspartate aminotransferase. | 0.737 |
SFU12506.1 | aroC | SAMN04489724_4118 | SAMN04489724_1952 | Histidinol-phosphate aminotransferase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.675 |
SFU12506.1 | hisC | SAMN04489724_4118 | SAMN04489724_4241 | Histidinol-phosphate aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.709 |
SFU15560.1 | SFU16114.1 | SAMN04489724_4433 | SAMN04489724_4512 | Histidinol-phosphate aminotransferase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 0.843 |
SFU15560.1 | SFU16131.1 | SAMN04489724_4433 | SAMN04489724_4514 | Histidinol-phosphate aminotransferase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.517 |
SFU15560.1 | SFU16140.1 | SAMN04489724_4433 | SAMN04489724_4515 | Histidinol-phosphate aminotransferase. | Prephenate dehydratase. | 0.706 |
SFU15560.1 | SFU16155.1 | SAMN04489724_4433 | SAMN04489724_4517 | Histidinol-phosphate aminotransferase. | Prephenate dehydrogenase. | 0.898 |
SFU15560.1 | SFU20711.1 | SAMN04489724_4433 | SAMN04489724_0350 | Histidinol-phosphate aminotransferase. | Aspartate aminotransferase. | 0.690 |
SFU15560.1 | aroC | SAMN04489724_4433 | SAMN04489724_1952 | Histidinol-phosphate aminotransferase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.662 |
SFU15560.1 | hisC | SAMN04489724_4433 | SAMN04489724_4241 | Histidinol-phosphate aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.685 |
SFU16114.1 | SFU12506.1 | SAMN04489724_4512 | SAMN04489724_4118 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Histidinol-phosphate aminotransferase. | 0.861 |
SFU16114.1 | SFU15560.1 | SAMN04489724_4512 | SAMN04489724_4433 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Histidinol-phosphate aminotransferase. | 0.843 |
SFU16114.1 | SFU16131.1 | SAMN04489724_4512 | SAMN04489724_4514 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.993 |
SFU16114.1 | SFU16140.1 | SAMN04489724_4512 | SAMN04489724_4515 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Prephenate dehydratase. | 0.965 |
SFU16114.1 | SFU16147.1 | SAMN04489724_4512 | SAMN04489724_4516 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Aspartate/methionine/tyrosine aminotransferase. | 0.803 |
SFU16114.1 | SFU16155.1 | SAMN04489724_4512 | SAMN04489724_4517 | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase. | Prephenate dehydrogenase. | 0.976 |
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