STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_01525Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
GV64_01440
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
 
 
 0.870
GV64_01515
5-dehydro-2-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.862
GV64_01510
Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.818
GV64_01505
5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.804
GV64_13490
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.802
GV64_01435
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.725
GV64_01445
MocC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.673
GV64_05635
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.641
GV64_08785
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.641
GV64_24270
UDP-N-acetyl-D-glucosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.641
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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