STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_02855ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (710 aa)    
Predicted Functional Partners:
GV64_02860
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.967
GV64_24420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.917
GV64_12420
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.908
GV64_24430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.852
GV64_23535
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.801
GV64_18555
Siderophore-interacting protein ViuB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.794
GV64_02215
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.769
GV64_18105
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.689
GV64_23530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.672
GV64_06115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.635
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.