STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_03520Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)    
Predicted Functional Partners:
GV64_03535
5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 0.952
GV64_03530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.907
GV64_03550
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.828
GV64_03540
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.784
GV64_03525
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.780
GV64_24290
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.768
GV64_24295
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.752
GV64_24285
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.746
alc
Allantoicase; Catalyzes the formation of S-ureidoglycolate and urea from allantoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family.
 
    0.679
GV64_24395
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.598
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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