STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_05010GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)    
Predicted Functional Partners:
GV64_09925
Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.848
GV64_14985
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.836
GV64_07225
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.817
GV64_19005
Cytochrome Cbb3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
    
 0.816
GV64_13265
Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.804
GV64_01955
Cytochrome B559 subunit alpha; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.680
GV64_05015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.608
GV64_07525
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      0.561
GV64_18410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.450
GV64_19820
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.450
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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