STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_05630Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (730 aa)    
Predicted Functional Partners:
GV64_13575
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.982
GV64_04925
Spindolin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.876
GV64_12765
Cellobiose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.827
GV64_12730
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.822
GV64_12860
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.804
GV64_03720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.799
GV64_21725
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.799
GV64_23560
N-acetylmannosamine kinase; Catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.799
GV64_24560
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.799
GV64_12835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.798
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.