STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_08515Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)    
Predicted Functional Partners:
GV64_07075
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.794
GV64_08520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
GV64_08525
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
GV64_08510
DNA repair ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.528
GV64_08530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.474
GV64_03140
Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.458
rsmA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
   
 
  0.446
GV64_09340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.443
GV64_08505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.423
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.