STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_14390Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (205 aa)    
Predicted Functional Partners:
GV64_19985
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
GV64_03115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
GV64_09340
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
GV64_07385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
GV64_15375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.710
GV64_05750
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.688
GV64_02160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.652
GV64_10375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.576
GV64_04515
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.527
recA
Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
     0.526
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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