STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_15270Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)    
Predicted Functional Partners:
GV64_13715
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.
 
 0.989
GV64_18295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.960
GV64_02445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.958
GV64_05960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.958
GV64_13390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.958
GV64_05115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.953
GV64_00760
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.877
GV64_20235
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.877
GV64_23940
Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.858
GV64_22645
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.822
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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