STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_172752OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family. (333 aa)    
Predicted Functional Partners:
GV64_17260
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.833
GV64_05115
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.712
GV64_17270
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.683
GV64_17265
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.541
GV64_08200
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.494
GV64_17280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
GV64_15735
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
GV64_07375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.455
argD
Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
     
 0.446
GV64_24290
Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.420
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.