STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_18375DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial histone-like protein family. (113 aa)    
Predicted Functional Partners:
GV64_03165
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.667
ihfA
Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
   
 
 0.535
GV64_02295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
  
  
 0.504
GV64_00345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.501
GV64_18005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
GV64_07545
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
GV64_18370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
   0.436
GV64_03170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.431
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.