STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_19090Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
GV64_03230
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Rsd/AlgQ family.
  
     0.725
GV64_21415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.677
GV64_07875
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
GV64_17990
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
GV64_00130
SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.522
GV64_07725
SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.522
GV64_11635
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
GV64_11630
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.491
GV64_01955
Cytochrome B559 subunit alpha; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
    0.490
GV64_02530
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.485
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.