STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_23175Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
GV64_17665
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.894
GV64_23425
Ferritin; Iron-storage protein.
     
 0.626
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.619
GV64_22520
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.612
cyaY
Frataxin; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.
     
 0.570
GV64_08880
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.556
GV64_09155
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.556
GV64_11630
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.556
GV64_14740
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.556
GV64_10605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.520
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.