STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GV64_24200Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology. (731 aa)    
Predicted Functional Partners:
GV64_03470
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.927
GV64_18280
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.917
GV64_22485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.907
GV64_00005
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.853
GV64_24450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.853
GV64_24205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.774
GV64_18580
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.739
GV64_24255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.697
GV64_09865
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.693
GV64_02455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.675
Your Current Organism:
Endozoicomonas elysicola
NCBI taxonomy Id: 305900
Other names: DSM 22380, E. elysicola, Endozoicomonas elysicola Kurahashi and Yokota 2007, IAM 15107, JCM 21568, KCTC 12372, strain MKT110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.