STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKZF1Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (725 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 
 0.947
SPATA5
Spermatogenesis associated 5.
   
 
 0.931
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 
 0.931
EIF6
Eukaryotic translation initiation factor 6.
    
   0.909
KATNAL2
Katanin catalytic subunit A1 like 2.
    
 
 0.799
RPL3
Ribosomal protein L3.
    
 
 0.774
RPL3L
Ribosomal protein L3 like.
    
 
 0.771
RPL24
Ribosomal protein L24.
    
   0.758
RPL19
Ribosomal protein L19.
    
   0.757
RPL8
Ribosomal protein L8.
    
   0.753
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.