STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC9Histone deacetylase 9. (1068 aa)    
Predicted Functional Partners:
MEF2B
Myocyte enhancer factor 2B.
   
 
 0.963
ARID4A
AT-rich interaction domain 4A.
    
 0.961
ARID4B
AT-rich interaction domain 4B.
    
 0.961
NCOR2
Nuclear receptor corepressor 2.
   
 0.936
HDAC4
Histone deacetylase 4.
  
 
0.895
MACROH2A2
macroH2A.2 histone.
   
 0.890
ENSMICP00000045819
annotation not available
    
 0.888
NCOR1
Nuclear receptor corepressor 1.
    
 0.883
H2AC20
H2A clustered histone 20.
    
 0.883
SIN3B
SIN3 transcription regulator family member B.
   
 0.880
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.