STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX27DEAD-box helicase 27. (764 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.997
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.994
RBM28
RNA binding motif protein 28.
   
 
 0.994
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.990
ENSMICP00000006008
annotation not available
  
 
 0.987
NSUN6
NOP2/Sun RNA methyltransferase 6.
  
 
 0.987
UTP14A
UTP14A small subunit processome component.
   
 0.986
P2RY11
Purinergic receptor P2Y11.
   
   0.979
ENSMICP00000031720
annotation not available
   
   0.979
GTPBP4
GTP binding protein 4.
   
 
 0.979
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.