STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD13Homeobox D13. (344 aa)    
Predicted Functional Partners:
FGF8
Fibroblast growth factor 8.
   
  
 0.607
EMX2
Empty spiracles homeobox 2.
    
 
 0.605
SPRY2
Sprouty RTK signaling antagonist 2.
      
 0.592
SHH
Sonic hedgehog signaling molecule.
      
 0.592
BMP7
Bone morphogenetic protein 7.
      
 0.592
HAND2
Heart and neural crest derivatives expressed 2.
    
 
 0.586
PAX6
Paired box 6.
      
 0.560
HTT
Huntingtin.
      
 0.557
MCPH1
Microcephalin 1.
      
 0.557
PBX1
PBX homeobox 1.
    
 
 0.550
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.