NCL protein (Microcebus murinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NCL

annotation not available (711 aa)

Predicted Functional Partners:

EIF3A

0.934

ENSMICP00000026690

0.919

NPM1

0.919

ENSMICP00000051154

0.919

PAN3

0.894

PAN2

0.889

HNRNPU

0.861

HNRNPA2B1

0.857

ENSMICP00000044988

0.844

NCBP1

0.823

Your Current Organism:

Microcebus murinus

NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF3A	ENSMICP00000044988	ENSMICP00000006908	ENSMICP00000044988	Eukaryotic translation initiation factor 3 subunit A.	annotation not available	0.620
EIF3A	HNRNPA2B1	ENSMICP00000006908	ENSMICP00000032754	Eukaryotic translation initiation factor 3 subunit A.	annotation not available	0.620
EIF3A	NCL	ENSMICP00000006908	ENSMICP00000002317	Eukaryotic translation initiation factor 3 subunit A.	annotation not available	0.934
ENSMICP00000026690	HNRNPU	ENSMICP00000026690	ENSMICP00000026905	annotation not available	Heterogeneous nuclear ribonucleoprotein U.	0.406
ENSMICP00000026690	NCL	ENSMICP00000026690	ENSMICP00000002317	annotation not available	annotation not available	0.919
ENSMICP00000044988	EIF3A	ENSMICP00000044988	ENSMICP00000006908	annotation not available	Eukaryotic translation initiation factor 3 subunit A.	0.620
ENSMICP00000044988	HNRNPU	ENSMICP00000044988	ENSMICP00000026905	annotation not available	Heterogeneous nuclear ribonucleoprotein U.	0.941
ENSMICP00000044988	NCBP1	ENSMICP00000044988	ENSMICP00000025097	annotation not available	Nuclear cap binding protein subunit 1.	0.696
ENSMICP00000044988	NCL	ENSMICP00000044988	ENSMICP00000002317	annotation not available	annotation not available	0.844
ENSMICP00000051154	HNRNPU	ENSMICP00000051154	ENSMICP00000026905	annotation not available	Heterogeneous nuclear ribonucleoprotein U.	0.406
ENSMICP00000051154	NCL	ENSMICP00000051154	ENSMICP00000002317	annotation not available	annotation not available	0.919
HNRNPA2B1	EIF3A	ENSMICP00000032754	ENSMICP00000006908	annotation not available	Eukaryotic translation initiation factor 3 subunit A.	0.620
HNRNPA2B1	HNRNPU	ENSMICP00000032754	ENSMICP00000026905	annotation not available	Heterogeneous nuclear ribonucleoprotein U.	0.941
HNRNPA2B1	NCBP1	ENSMICP00000032754	ENSMICP00000025097	annotation not available	Nuclear cap binding protein subunit 1.	0.696
HNRNPA2B1	NCL	ENSMICP00000032754	ENSMICP00000002317	annotation not available	annotation not available	0.857
HNRNPU	ENSMICP00000026690	ENSMICP00000026905	ENSMICP00000026690	Heterogeneous nuclear ribonucleoprotein U.	annotation not available	0.406
HNRNPU	ENSMICP00000044988	ENSMICP00000026905	ENSMICP00000044988	Heterogeneous nuclear ribonucleoprotein U.	annotation not available	0.941
HNRNPU	ENSMICP00000051154	ENSMICP00000026905	ENSMICP00000051154	Heterogeneous nuclear ribonucleoprotein U.	annotation not available	0.406
HNRNPU	HNRNPA2B1	ENSMICP00000026905	ENSMICP00000032754	Heterogeneous nuclear ribonucleoprotein U.	annotation not available	0.941
HNRNPU	NCBP1	ENSMICP00000026905	ENSMICP00000025097	Heterogeneous nuclear ribonucleoprotein U.	Nuclear cap binding protein subunit 1.	0.739