STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE6APhosphodiesterase 6A. (854 aa)    
Predicted Functional Partners:
PDE6G
Phosphodiesterase 6G.
   
 0.984
GNAT1
G protein subunit alpha transducin 1.
   
 0.973
GNAT2
G protein subunit alpha transducin 2.
   
 0.959
GNGT1
G protein subunit gamma transducin 1.
   
 
 0.936
GUCY2C
Guanylate cyclase 2C.
    
 0.909
PDE6B
Phosphodiesterase 6B.
  
  
0.907
ADCY6
Adenylate cyclase 6.
    
 0.907
ADCY3
Adenylate cyclase 3.
    
 0.907
ADCY5
Adenylate cyclase 5.
    
 0.907
PDE6H
Phosphodiesterase 6H.
   
 
 0.902
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.