PBRM1 protein (Microcebus murinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PBRM1

Polybromo 1. (1713 aa)

Predicted Functional Partners:

ARID2

0.998

SMARCB1

0.998

ENSMICP00000043635

0.998

SMARCC2

0.997

SMARCA4

0.997

BRD7

0.997

MYSM1

0.996

SMARCD1

0.996

SMARCA2

0.995

SMARCC1

0.995

Your Current Organism:

Microcebus murinus

NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID2	BRD7	ENSMICP00000001356	ENSMICP00000050397	AT-rich interaction domain 2.	Bromodomain containing 7.	0.992
ARID2	ENSMICP00000043635	ENSMICP00000001356	ENSMICP00000043635	AT-rich interaction domain 2.	annotation not available	0.900
ARID2	MYSM1	ENSMICP00000001356	ENSMICP00000037026	AT-rich interaction domain 2.	Myb like, SWIRM and MPN domains 1.	0.955
ARID2	PBRM1	ENSMICP00000001356	ENSMICP00000002632	AT-rich interaction domain 2.	Polybromo 1.	0.998
ARID2	SMARCA2	ENSMICP00000001356	ENSMICP00000004717	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.986
ARID2	SMARCA4	ENSMICP00000001356	ENSMICP00000035091	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.992
ARID2	SMARCB1	ENSMICP00000001356	ENSMICP00000041687	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.992
ARID2	SMARCC1	ENSMICP00000001356	ENSMICP00000012525	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.	0.984
ARID2	SMARCC2	ENSMICP00000001356	ENSMICP00000030550	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2.	0.991
ARID2	SMARCD1	ENSMICP00000001356	ENSMICP00000039064	AT-rich interaction domain 2.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.989
BRD7	ARID2	ENSMICP00000050397	ENSMICP00000001356	Bromodomain containing 7.	AT-rich interaction domain 2.	0.992
BRD7	ENSMICP00000043635	ENSMICP00000050397	ENSMICP00000043635	Bromodomain containing 7.	annotation not available	0.992
BRD7	MYSM1	ENSMICP00000050397	ENSMICP00000037026	Bromodomain containing 7.	Myb like, SWIRM and MPN domains 1.	0.956
BRD7	PBRM1	ENSMICP00000050397	ENSMICP00000002632	Bromodomain containing 7.	Polybromo 1.	0.997
BRD7	SMARCA2	ENSMICP00000050397	ENSMICP00000004717	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.	0.990
BRD7	SMARCA4	ENSMICP00000050397	ENSMICP00000035091	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.	0.997
BRD7	SMARCB1	ENSMICP00000050397	ENSMICP00000041687	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.997
BRD7	SMARCC1	ENSMICP00000050397	ENSMICP00000012525	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.	0.992
BRD7	SMARCC2	ENSMICP00000050397	ENSMICP00000030550	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2.	0.997
BRD7	SMARCD1	ENSMICP00000050397	ENSMICP00000039064	Bromodomain containing 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.997