STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD5piggyBac transposable element derived 5. (511 aa)    
Predicted Functional Partners:
CD3E
CD3e molecule.
   
 0.952
CD3G
CD3g molecule.
   
 0.925
CD247
CD247 molecule.
   
 0.840
CYB5R4
Cytochrome b5 reductase 4.
  
 0.790
HIRA
Histone cell cycle regulator.
    
 0.736
PGBD1
piggyBac transposable element derived 1.
    
 
0.722
FDX1
Ferredoxin 1.
  
 0.718
FDX2
annotation not available
  
 0.718
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
  
 0.709
PGBD2
piggyBac transposable element derived 2.
    
 
 0.700
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.