STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL17A1Collagen type XVII alpha 1 chain. (1382 aa)    
Predicted Functional Partners:
ITGB4
Integrin subunit beta 4.
   
 0.887
PLEC
Plectin.
    
 0.837
DST
Dystonin.
    
 0.830
ITGA6
Integrin subunit alpha 6.
   
 0.826
CD151
CD151 molecule (Raph blood group).
     
 0.785
COL6A2
Collagen type VI alpha 2 chain.
   
0.756
DSP
Desmoplakin.
    
 0.746
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.743
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.732
LAMA3
Laminin subunit alpha 3.
   
 0.731
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.