STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATL2PAT1 homolog 2. (354 aa)    
Predicted Functional Partners:
LSM1
LSM1 homolog, mRNA degradation associated.
    
 0.997
LSM4
annotation not available
    
 0.995
XRN1
5'-3' exoribonuclease 1.
    
 0.991
DDX6
DEAD-box helicase 6.
   
 0.990
DCP2
Decapping mRNA 2.
    
 0.988
EDC3
Enhancer of mRNA decapping 3.
    
 0.983
DCP1A
Decapping mRNA 1A.
    
 0.977
EDC4
Enhancer of mRNA decapping 4.
    
 0.977
ENSMICP00000009090
annotation not available
    
 0.975
LSM7
annotation not available
    
 0.975
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.