STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSTKphosphoseryl-tRNA kinase. (297 aa)    
Predicted Functional Partners:
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
     
 0.965
ENSMICP00000020144
annotation not available
     
 0.925
SARS1
seryl-tRNA synthetase 1.
     
 0.925
TMEM179B
Transmembrane protein 179B.
     
 0.890
SECISBP2
SECIS binding protein 2.
      
 0.755
GAD2
Glutamate decarboxylase 2.
     
 0.665
CSAD
Cysteine sulfinic acid decarboxylase.
     
 0.665
SGPL1
Sphingosine-1-phosphate lyase 1.
     
 0.665
GAD1
Glutamate decarboxylase 1.
     
 0.665
DDC
Dopa decarboxylase.
     
 0.665
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.