STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC13DUnc-13 homolog D. (1088 aa)    
Predicted Functional Partners:
RAB27A
RAB27A, member RAS oncogene family.
    
 
 0.764
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.689
STX11
Syntaxin 11.
   
  
 0.586
STXBP2
Syntaxin binding protein 2.
      
 0.575
PRF1
Perforin 1.
      
 0.556
LYST
Lysosomal trafficking regulator.
   
  
 0.553
STX19
Syntaxin 19.
      
 0.530
FHL2
Four and a half LIM domains 2.
      
 0.475
PALB2
Partner and localizer of BRCA2.
     
 0.473
NDUFAB1
annotation not available
     
 0.468
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.