STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH8Atonal bHLH transcription factor 8. (312 aa)    
Predicted Functional Partners:
LTBP2
Latent transforming growth factor beta binding protein 2.
    
 
 0.598
THBS1
Thrombospondin 1.
    
 
 0.598
NFATC4
Nuclear factor of activated T cells 4.
   
  
 0.597
TIMP2
TIMP metallopeptidase inhibitor 2.
   
  
 0.593
TIMP3
TIMP metallopeptidase inhibitor 3.
   
  
 0.593
BGN
Biglycan.
      
 0.592
CALU
Calumenin.
      
 0.592
COL16A1
Collagen type XVI alpha 1 chain.
      
 0.592
TGFB1I1
Transforming growth factor beta 1 induced transcript 1.
      
 0.592
ACTA2
Actin alpha 2, smooth muscle.
      
 0.592
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.