STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTLC2Serine palmitoyltransferase long chain base subunit 2. (564 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
  
0.991
SPTSSA
Serine palmitoyltransferase small subunit A.
    
 0.946
ORMDL3
ORMDL sphingolipid biosynthesis regulator 3.
    
 
 0.905
KDSR
3-ketodihydrosphingosine reductase.
     
 0.892
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.883
SHMT1
Serine hydroxymethyltransferase 1.
  
 
 0.860
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.860
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
    
 0.856
ENSMICP00000044325
annotation not available
    
 0.856
MTOR
Mechanistic target of rapamycin kinase.
    
 0.846
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.