STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPHP1Nephrocystin 1. (716 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
   
 0.989
ITSN2
Intersectin 2.
     
0.969
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.945
RPGRIP1L
RPGRIP1 like.
    
 0.941
DCTN2
Dynactin subunit 2.
    
 0.858
ENSMICP00000042582
annotation not available
    
 
 0.833
ARPC4
Actin related protein 2/3 complex subunit 4.
   
 0.821
DCTN4
Dynactin subunit 4.
    
 0.821
SEPTIN2
Septin 2.
    
 0.820
ARPC3
Actin related protein 2/3 complex subunit 3.
   
 0.819
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.