STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional regulating factor 1. (1212 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
    
 
 0.899
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
    
 
0.782
HDAC1
Histone deacetylase 1.
    
 
 0.601
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.591
ZBTB18
Zinc finger and BTB domain containing 18.
    
 
 0.576
APBB2
Amyloid beta precursor protein binding family B member 2.
      
 0.547
THAP5
THAP domain containing 5.
  
 
   0.516
BTBD8
BTB domain containing 8.
  
     0.508
IKZF2
IKAROS family zinc finger 2.
    
 
 0.506
CLUL1
Clusterin like 1.
  
     0.477
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.