STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDELR3KDEL endoplasmic reticulum protein retention receptor 3. (217 aa)    
Predicted Functional Partners:
COPB1
Coatomer protein complex subunit beta 1.
   
 0.848
SURF4
Surfeit 4.
   
 0.841
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.836
ARCN1
Archain 1.
   
 
 0.808
COPA
Coatomer protein complex subunit alpha.
     
 0.790
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.789
YKT6
YKT6 v-SNARE homolog.
   
 
 0.787
COPB2
Coatomer protein complex subunit beta 2.
   
 
 0.783
TMED2
Transmembrane p24 trafficking protein 2.
   
 
 0.782
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
    
 0.774
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.