Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BOP1 | BRIX1 | ENSMICP00000014269 | ENSMICP00000005169 | BOP1 ribosomal biogenesis factor. | Biogenesis of ribosomes BRX1. | 0.999 |
BOP1 | EBNA1BP2 | ENSMICP00000014269 | ENSMICP00000006371 | BOP1 ribosomal biogenesis factor. | EBNA1 binding protein 2. | 0.999 |
BOP1 | GTPBP4 | ENSMICP00000014269 | ENSMICP00000036687 | BOP1 ribosomal biogenesis factor. | GTP binding protein 4. | 0.999 |
BOP1 | NIFK | ENSMICP00000014269 | ENSMICP00000019710 | BOP1 ribosomal biogenesis factor. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.998 |
BOP1 | NIP7 | ENSMICP00000014269 | ENSMICP00000045521 | BOP1 ribosomal biogenesis factor. | Nucleolar pre-rRNA processing protein NIP7. | 0.997 |
BOP1 | NOC2L | ENSMICP00000014269 | ENSMICP00000043759 | BOP1 ribosomal biogenesis factor. | NOC2 like nucleolar associated transcriptional repressor. | 0.999 |
BOP1 | NOC3L | ENSMICP00000014269 | ENSMICP00000005080 | BOP1 ribosomal biogenesis factor. | NOC3 like DNA replication regulator. | 0.998 |
BOP1 | NSUN3 | ENSMICP00000014269 | ENSMICP00000010821 | BOP1 ribosomal biogenesis factor. | NOP2/Sun RNA methyltransferase 3. | 0.916 |
BOP1 | PUM3 | ENSMICP00000014269 | ENSMICP00000046541 | BOP1 ribosomal biogenesis factor. | Pumilio RNA binding family member 3. | 0.949 |
BRIX1 | BOP1 | ENSMICP00000005169 | ENSMICP00000014269 | Biogenesis of ribosomes BRX1. | BOP1 ribosomal biogenesis factor. | 0.999 |
BRIX1 | EBNA1BP2 | ENSMICP00000005169 | ENSMICP00000006371 | Biogenesis of ribosomes BRX1. | EBNA1 binding protein 2. | 0.999 |
BRIX1 | GTPBP4 | ENSMICP00000005169 | ENSMICP00000036687 | Biogenesis of ribosomes BRX1. | GTP binding protein 4. | 0.999 |
BRIX1 | NIFK | ENSMICP00000005169 | ENSMICP00000019710 | Biogenesis of ribosomes BRX1. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.999 |
BRIX1 | NIP7 | ENSMICP00000005169 | ENSMICP00000045521 | Biogenesis of ribosomes BRX1. | Nucleolar pre-rRNA processing protein NIP7. | 0.999 |
BRIX1 | NOC2L | ENSMICP00000005169 | ENSMICP00000043759 | Biogenesis of ribosomes BRX1. | NOC2 like nucleolar associated transcriptional repressor. | 0.998 |
BRIX1 | NOC3L | ENSMICP00000005169 | ENSMICP00000005080 | Biogenesis of ribosomes BRX1. | NOC3 like DNA replication regulator. | 0.999 |
BRIX1 | NSUN3 | ENSMICP00000005169 | ENSMICP00000010821 | Biogenesis of ribosomes BRX1. | NOP2/Sun RNA methyltransferase 3. | 0.954 |
BRIX1 | PUM3 | ENSMICP00000005169 | ENSMICP00000046541 | Biogenesis of ribosomes BRX1. | Pumilio RNA binding family member 3. | 0.993 |
EBNA1BP2 | BOP1 | ENSMICP00000006371 | ENSMICP00000014269 | EBNA1 binding protein 2. | BOP1 ribosomal biogenesis factor. | 0.999 |
EBNA1BP2 | BRIX1 | ENSMICP00000006371 | ENSMICP00000005169 | EBNA1 binding protein 2. | Biogenesis of ribosomes BRX1. | 0.999 |
page 1 of 5