STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC130Coiled-coil domain containing 130. (393 aa)    
Predicted Functional Partners:
PRPF19
pre-mRNA processing factor 19.
    
   0.985
CDC5L
Cell division cycle 5 like.
    
   0.983
JUP
Junction plakoglobin.
    
   0.983
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
   0.983
CDC40
Cell division cycle 40.
    
 
 0.983
WDR25
WD repeat domain 25.
    
   0.935
CTNNB1
Catenin beta 1.
    
   0.893
EFL1
Elongation factor like GTPase 1.
    
   0.776
EEF2
Eukaryotic translation elongation factor 2.
    
   0.776
GFM1
G elongation factor mitochondrial 1.
    
   0.776
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.