STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTTNRotatin. (2221 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2 group IVA.
   
 
 0.843
CD226
CD226 molecule.
 
   
 0.772
ITGAL
Integrin subunit alpha L.
     
 0.770
TH
Tyrosine hydroxylase.
     
 0.745
GOT1
Glutamic-oxaloacetic transaminase 1.
    
 0.724
ENSMICP00000048011
annotation not available
    
 0.709
TYR
Tyrosinase.
     
 0.687
PLB1
Phospholipase B1.
   
  0.681
STIL
STIL centriolar assembly protein.
    
 
 0.681
PLA2G6
Phospholipase A2 group VI.
   
 0.675
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.