STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCPSDecapping enzyme, scavenger. (339 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
    
   0.815
XRN1
5'-3' exoribonuclease 1.
    
 
 0.695
TREH
Trehalase.
   
 
 0.631
DCP2
Decapping mRNA 2.
   
  
 0.582
XRN2
5'-3' exoribonuclease 2.
   
  
 0.577
DDX6
DEAD-box helicase 6.
   
  
 0.574
NDOR1
NADPH dependent diflavin oxidoreductase 1.
 
    
 0.571
DCP1B
Decapping mRNA 1B.
      
 0.564
TSEN2
tRNA splicing endonuclease subunit 2.
      
 0.558
LSM12
LSM12 homolog.
      
 0.529
Your Current Organism:
Microcebus murinus
NCBI taxonomy Id: 30608
Other names: M. murinus, gray mouse lemur, grey mouse lemur
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.